Research Group

  • Overview
  • Datasets 7
  • People 11
  • Publications 5
  • Information Products 0
Genomic Responses to the Deepwater Horizon event and development of high-throughput biological assays for oil spills

W. Kelley Thomas

Gulf of Mexico Research Initiative (GoMRI)

RFP-V

Dataset Available

Whole genome DNA sequences of Gulf of Mexico invertebrates

Authors: Joseph Sevigny, Francesca Leasi, Kelley Thomas, Michael Reuscher, Holly Bik, Paul Montagna and Krystalynne Morris
Published On: Aug 05 2020 21:31 UTC
DOI: 10.7266/n7-pchj-dh15
UDI: R5.x272.000:0001
File Size: 13.97 KB
Dataset Available

Whole genome DNA sequences of the spionid polychaete Streblospio collected from Oso Bay and Palmetto Park, Corpus Christi on 2017-01-01

Authors: Joseph Sevigny, Francesca Leasi, Michael Reuscher, Anja Schulze , Holly Bik, Paul Montagna, Kelley W. Thomas.
Published On: Jul 06 2020 19:28 UTC
File Format: xlsx
DOI: 10.7266/n7-d9rb-x333
UDI: R5.x272.000:0002
File Size: 9.08 KB
Dataset

Benthic Meiofauna and Macrofauna Communities of the Northern Gulf of Mexico, sampled during the 2015 C-Image program

Authors:
Identified On: Dec 23 2024 06:17 UTC
DOI:
UDI: R5.x272.000:0003
Dataset Available

Dataset for: Nematode‐associated microbial taxa do not correlate with host phylogeny, geographic region or feeding morphology in marine sediment habitats

Authors: Holly Bik
Published On: Aug 02 2018 10:04 UTC
File Format: csv, biom, jpg, sh, txt
DOI: 10.7266/N7959G4X
UDI: R5.x272.000:0004
File Size: 103.12 MB
Dataset Available

Dataset for: Biodiversity estimates and ecological interpretations of meiofaunal communities are biased by the taxonomic approach

Authors: Joseph Sevigny, Francesca Leasi, and Kelley Thomas
Published On: Nov 27 2018 17:35 UTC
File Format: py, md, sh, tsv, csv
DOI: 10.7266/n7-szj8-1531
UDI: R5.x272.000:0005
File Size: 622.14 KB
Dataset Available

Dataset for: Marker genes as predictors of shared genomic function

Authors: Joseph L. Sevigny, Derek Rothenheber, Krystalle Sharlyn Diaz, Ying Zhang, Kristin Agustsson, R. Daniel Bergeron, W. Kelley Thomas
Published On: Sep 16 2019 14:04 UTC
File Format: xlsx, py, md
DOI: 10.7266/n7-tc8j-1562
UDI: R5.x272.000:0006
File Size: 1.6 MB
Dataset Available

Benthic footprint of the Deepwater Horizon oil spill data analyzed from sediment cores collected aboard R/V Ocean Veritas and R/V Gyre cruises in the northern Gulf of Mexico from 2010-09-16 to 2010-10-22

Authors: Paul Montagna
Published On: Mar 04 2020 17:16 UTC
File Format: xlsx
DOI: 10.7266/FDKAJKNF
UDI: R5.x272.000:0007
File Size: 173.06 KB

Taruna Aggarwal
Assistant Specialist
University of California Riverside / Department of Nematology

taruna@ucr.edu

Noe Barrera
Research Specialist
Texas A&M University-Corpus Christi / The Harte Research Institute for Gulf of Mexico Studies

Noe.Barrera@tamucc.edu

Holly M. Bik
Assistant Professor
University of California Riverside / Department of Nematology

holly.bik@gmail.com

Jonathan Coddington
Senior Scientist
Smithsonian Institution / Global Genome Initiative

coddington@si.edu

Daniel Distel
Research Professor
Northeastern University / Marine Science Center

d.distel@neu.edu

Jeffrey Hall
Research Scientist
University of New Hampshire / Hubbard Center for Genome Studies

jeffrey.hall@unh.edu

Paul A. Montagna
Professor
Texas A&M University-Corpus Christi / The Harte Research Institute for Gulf of Mexico Studies

paul.montagna@tamucc.edu

Krystalynne Morris
Laboratory Supervisor
University of New Hampshire / Hubbard Center for Genome Studies

krystalynne.morris@unh.edu

Jon L. Norenburg
Research Zoologist
Smithsonian Institution / Department of Invertebrate Zoology

norenburgj@si.edu

Michael Reuscher
Environmental Consultant
Ecoanalysts, Inc.

mreuscher@ecoanalysts.com

W. Kelley Thomas
Professor
University of New Hampshire / Hubbard Center for Genome Studies

kelley.thomas@unh.edu

Leasi, F., Sevigny, J. L., Laflamme, E. M., Artois, T., Curini-Galletti, M., de Jesus Navarrete, A., … Thomas, W. K. (2018). Biodiversity estimates and ecological interpretations of meiofaunal communities are biased by the taxonomic approach. Communications Biology, 1(1). doi:10.1038/s42003-018-0119-2

Pereira, T. J., De Santiago, A., Schuelke, T., Hardy, S. M., & Bik, H. M. (2020). The impact of intragenomic rRNA variation on metabarcoding‐derived diversity estimates: A case study from marine nematodes. Environmental DNA. doi:10.1002/edn3.77

Reuscher, M. G., Baguley, J. G., & Montagna, P. A. (2020). The expanded footprint of the Deepwater Horizon oil spill in the Gulf of Mexico deep-sea benthos. PLOS ONE, 15(6), e0235167. doi:10.1371/journal.pone.0235167

Schuelke, T., Pereira, T. J., Hardy, S. M., & Bik, H. M. (2018). Nematode-associated microbial taxa do not correlate with host phylogeny, geographic region or feeding morphology in marine sediment habitats. Molecular Ecology, 27(8), 1930–1951. doi:10.1111/mec.14539

Sevigny, J. L., Rothenheber, D., Diaz, K. S., Zhang, Y., Agustsson, K., Bergeron, R. D., & Thomas, W. K. (2019). Marker genes as predictors of shared genomic function. BMC Genomics, 20(1). doi:10.1186/s12864-019-5641-1